Legionella pneumophila
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers 12_4030
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 74
N50 Contigs 108,268 bp
Longest Contig 286,864 bp
Scaffold Count 29
N50 Scaffolds 549,491 bp
Longest Scaffold 731,902 bp
Genome Size 3,384,012 bp
Protein Count 3,025
Coding Density 87.97%
GC Percentage 38.22%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12_4030
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2627143
Country United Kingdom:Scotland
Date 2014-10-21
Genbank Assembly Accession GCA_000823325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Patient
Latitude Longitude None
Molecule Count N/A
CDS Count 3,041
Refseq Category na
Seq Rel Date 2014/10/21
Spanned Gaps 45
Species Taxid 446
SSU Count 1
Submitter ROSLIN
Taxid 446
Total Gap Length 1265
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CCZB00000000.1