Aeromonas salmonicida
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers CIP 103209
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 133
N50 Contigs 89,543 bp
Longest Contig 339,238 bp
Scaffold Count 128
N50 Scaffolds 89,543 bp
Longest Scaffold 339,238 bp
Genome Size 4,740,147 bp
Protein Count 4,529
Coding Density 86.51%
GC Percentage 58.51%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name PRJEB7036
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2752412
Country None
Date 2014-12-1
Genbank Assembly Accession GCA_000820065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,389
Refseq Category na
Seq Rel Date 2014/12/01
Spanned Gaps 5
Species Taxid 645
SSU Count 2
Submitter UCONNMISEQ
Taxid 29491
Total Gap Length 593
Translation Table 11
tRNA Count (total) 90
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CDDW00000000.1