Streptomyces nodosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces nodosus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces nodosus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces nodosus
NCBI Strain Identifiers ATCC 14899
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.36%
CheckM Contamination 1.93%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 111
N50 Contigs 110,805 bp
Longest Contig 556,241 bp
Scaffold Count 1
N50 Scaffolds 7,714,110 bp
Longest Scaffold 7,714,110 bp
Genome Size 7,714,110 bp
Protein Count 6,817
Coding Density 85.73%
GC Percentage 70.88%
Ambiguous Bases 31
GTDB representative of species True
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM81954v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03020625
Country Venezuela
Date 2015-01-16
Genbank Assembly Accession GCA_000819545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Orinoco river basin
Latitude Longitude None
Molecule Count 1
CDS Count 6,814
Refseq Category representative genome
Seq Rel Date 2015/01/16
Spanned Gaps 110
Species Taxid 40318
SSU Count 5
Submitter University College Dublin
Taxid 40318
Total Gap Length 8886
Translation Table 11
tRNA Count (total) 68
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None