Caballeronia concitans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia concitans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia sp. MR1
NCBI Strain Identifiers MR1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544615.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 58
N50 Contigs 244,722 bp
Longest Contig 432,733 bp
Scaffold Count 58
N50 Scaffolds 244,722 bp
Longest Scaffold 432,733 bp
Genome Size 6,019,671 bp
Protein Count 5,559
Coding Density 87.64%
GC Percentage 63.34%
Ambiguous Bases N/A
GTDB representative GCA_001544615.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Burkholderia_sp_MR1_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03252282
Country USA: Miami
Date 2015-1-15
Genbank Assembly Accession GCA_000818655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Simulated Florida Golf course soil sample
Latitude Longitude None
Molecule Count N/A
CDS Count 5,529
Refseq Category na
Seq Rel Date 2015/01/15
Spanned Gaps 0
Species Taxid 870478
SSU Count 1
Submitter Oak Ridge National Lab
Taxid 870478
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWHM00000000.1