Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers CCS02
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 185
N50 Contigs 303,643 bp
Longest Contig 1,143,795 bp
Scaffold Count 182
N50 Scaffolds 303,643 bp
Longest Scaffold 1,143,795 bp
Genome Size 5,715,630 bp
Protein Count 5,114
Coding Density 86.68%
GC Percentage 45.48%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name V_campbellii_051011E_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00019141
Country Australia
Date 2015-1-9
Genbank Assembly Accession GCA_000818355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,152
Refseq Category na
Seq Rel Date 2015/01/09
Spanned Gaps 3
Species Taxid 680
SSU Count 33
Submitter University of Miyazaki
Taxid 680
Total Gap Length 165
Translation Table 11
tRNA Count (total) 125
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBKX00000000.1