Clostridium_F botulinum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_F; s__Clostridium_F botulinum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum; x__Clostridium botulinum CDC_1436
NCBI Strain Identifiers CDC_1436
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001276985.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 2
N50 Contigs 4,089,683 bp
Longest Contig 4,089,683 bp
Scaffold Count 2
N50 Scaffolds 4,089,683 bp
Longest Scaffold 4,089,683 bp
Genome Size 4,365,669 bp
Protein Count 4,208
Coding Density 81.64%
GC Percentage 28.00%
Ambiguous Bases N/A
GTDB representative GCA_001276985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM81793v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03222820
Country USA: UT
Date 2015-1-14
Genbank Assembly Accession GCA_000817935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool (infant)
Latitude Longitude None
Molecule Count 2
CDS Count 4,237
Refseq Category na
Seq Rel Date 2015/01/14
Spanned Gaps 0
Species Taxid 1491
SSU Count 8
Submitter Los Alamos National Laboratory
Taxid 1408283
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None