GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio owensii |
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Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio owensii |
Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio owensii; x__Vibrio owensii CAIM 1854 = LMG 25443 |
NCBI Strain Identifiers | DY05 |
GTDB Type Material Designation | type strain of species |
GTDB Representative of Species | True (21 genomes in species cluster) |
CheckM Completeness | 100.0% |
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CheckM Contamination | 1.43% |
CheckM Strain Heterogeneity | 0.0 |
5S Count | 0 |
16S Count | 1 |
23S Count | 1 |
tRNA Count | 18 |
Contig Count | 120 |
N50 Contigs | 124,014 bp |
Longest Contig | 380,039 bp |
Scaffold Count | 119 |
N50 Scaffolds | 124,014 bp |
Longest Scaffold | 380,039 bp |
Genome Size | 6,345,380 bp |
Protein Count | 5,986 |
Coding Density | 86.13% |
GC Percentage | 45.03% |
Ambiguous Bases | 10 |
GTDB representative of species | True |
Assembly Level | Scaffold |
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Assembly Name | ASM81781v1 |
Assembly Type | n/a |
Bioproject | PRJNA224116 |
Biosample | SAMN02946409 |
Country | Australia: AIMS Townsville |
Date | 2015-1-14 |
Genbank Assembly Accession | GCA_000817815.1 |
Genome Category | Isolate |
Genome Representation | full |
Isolate | None |
Isolation Source | diseased larvae |
Latitude Longitude | None |
Molecule Count | N/A |
CDS Count | 5,934 |
Refseq Category | na |
Seq Rel Date | 2015/01/14 |
Spanned Gaps | 1 |
Species Taxid | 696485 |
SSU Count | 1 |
Submitter | Australian Institute of Marine Science |
Taxid | 1229493 |
Total Gap Length | 16 |
Translation Table | 11 |
tRNA Count (total) | 92 |
Type Material | assembly from type material |
Unspanned Gaps | 0 |
Version Status | latest |
WGS Master | JPRD00000000.1 |