Helicobacter pylori_C
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_C
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
NCBI Strain Identifiers Hp238
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000277405.1)
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 1,586,473 bp
Longest Contig 1,586,473 bp
Scaffold Count 1
N50 Scaffolds 1,586,473 bp
Longest Scaffold 1,586,473 bp
Genome Size 1,586,473 bp
Protein Count 1,531
Coding Density 91.20%
GC Percentage 38.70%
Ambiguous Bases N/A
GTDB representative GCA_000277405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM81702v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03154060
Country Taiwan
Date 2015-1-9
Genbank Assembly Accession GCA_000817025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gastric biopsy
Latitude Longitude 23.00 N 120.12 E
Molecule Count 1
CDS Count 1,525
Refseq Category na
Seq Rel Date 2015/01/09
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter National Cheng Kung University
Taxid 210
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None