Campylobacter_D subantarcticus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D subantarcticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter subantarcticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter subantarcticus; x__Campylobacter subantarcticus LMG 24374
NCBI Strain Identifiers LMG 24374
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000816305.1)
Genome Characteristics
CheckM Completeness 98.41%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 1,782,536 bp
Longest Contig 1,782,536 bp
Scaffold Count 1
N50 Scaffolds 1,782,536 bp
Longest Scaffold 1,782,536 bp
Genome Size 1,782,536 bp
Protein Count 1,755
Coding Density 93.06%
GC Percentage 29.94%
Ambiguous Bases N/A
GTDB representative GCA_000816305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM81626v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03248548
Country South Georgia and the South Sandwich Islands
Date 2015-1-7
Genbank Assembly Accession GCA_000816265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Gentoo penguin
Latitude Longitude None
Molecule Count 1
CDS Count 1,746
Refseq Category na
Seq Rel Date 2015/01/07
Spanned Gaps 0
Species Taxid 497724
SSU Count 3
Submitter USDA, ARS
Taxid 1388751
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None