Pandoraea pulmonicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Pandoraea; s__Pandoraea pulmonicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Pandoraea; s__Pandoraea pulmonicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Pandoraea; s__Pandoraea pulmonicola
NCBI Strain Identifiers DSM 16583
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 5,867,621 bp
Longest Contig 5,867,621 bp
Scaffold Count 1
N50 Scaffolds 5,867,621 bp
Longest Scaffold 5,867,621 bp
Genome Size 5,867,621 bp
Protein Count 5,035
Coding Density 86.58%
GC Percentage 64.30%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM81510v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03263587
Country Canada
Date 2016-11-17
Genbank Assembly Accession GCA_000815105.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude None
Molecule Count 1
Protein Count 4,978
Refseq Category na
Seq Rel Date 2016/11/17
Spanned Gaps 0
Species Taxid 93221
SSU Count 4
Submitter University of Malaya
Taxid 93221
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None