Microbacterium sp003293595
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sp003293595
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium hominis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium hominis
NCBI Strain Identifiers TPW29
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003293595.1)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 28
N50 Contigs 174,671 bp
Longest Contig 531,219 bp
Scaffold Count 28
N50 Scaffolds 174,671 bp
Longest Scaffold 531,219 bp
Genome Size 2,887,813 bp
Protein Count 2,733
Coding Density 92.35%
GC Percentage 69.37%
Ambiguous Bases N/A
GTDB representative GCA_003293595.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM81380v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03256222
Country Malaysia: Sungai Gabai Waterfall; Selangor
Date 2015-1-2
Genbank Assembly Accession GCA_000813805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Waterfall
Latitude Longitude None
Molecule Count N/A
CDS Count 2,704
Refseq Category na
Seq Rel Date 2015/01/02
Spanned Gaps 0
Species Taxid 162426
SSU Count 1
Submitter University of Malaya
Taxid 162426
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWSZ00000000.1