Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas marina
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas sp. ECSMB14103
NCBI Strain Identifiers ECSMB14103
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000238335.3)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 3
tRNA Count 18
Contig Count 32
N50 Contigs 413,937 bp
Longest Contig 1,079,592 bp
Scaffold Count 32
N50 Scaffolds 413,937 bp
Longest Scaffold 1,079,592 bp
Genome Size 4,107,405 bp
Protein Count 3,702
Coding Density 88.98%
GC Percentage 39.68%
Ambiguous Bases N/A
GTDB representative GCA_000238335.3
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM81306v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03253078
Country China:Zhoushan; East China Sea
Date 2015-1-2
Genbank Assembly Accession GCA_000813065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine biofilm from surface of adult mussels
Latitude Longitude 30.43 N 122.46 E
Molecule Count N/A
CDS Count 3,706
Refseq Category na
Seq Rel Date 2015/01/02
Spanned Gaps 0
Species Taxid 1580062
SSU Count 0
Submitter shanghai ocean university
Taxid 1580062
Total Gap Length 0
Translation Table 11
tRNA Count (total) 121
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWGY00000000.1