Nitrosopelagicus brevis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Nitrososphaeria; o__Nitrososphaerales; f__Nitrosopumilaceae; g__Nitrosopelagicus; s__Nitrosopelagicus brevis
Filtered NCBI Taxonomy d__Archaea; p__Thaumarchaeota; c__; o__; f__; g__Candidatus Nitrosopelagicus; s__Candidatus Nitrosopelagicus brevis
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Thaumarchaeota; x__unclassified Thaumarchaeota; g__Candidatus Nitrosopelagicus; s__Candidatus Nitrosopelagicus brevis
NCBI Strain Identifiers CN25
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 1
N50 Contigs 1,232,128 bp
Longest Contig 1,232,128 bp
Scaffold Count 1
N50 Scaffolds 1,232,128 bp
Longest Scaffold 1,232,128 bp
Genome Size 1,232,128 bp
Protein Count 1,470
Coding Density 93.85%
GC Percentage 33.16%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM81218v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03273964
Country None
Date 2014-12-31
Genbank Assembly Accession GCA_000812185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,421
Refseq Category na
Seq Rel Date 2014/12/31
Spanned Gaps 0
Species Taxid 1410606
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1410606
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None