Lactococcus lactis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis; sb__Lactococcus lactis subsp. lactis
NCBI Strain Identifiers fresh raw milk;S0
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900099625.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,488,699 bp
Longest Contig 2,488,699 bp
Scaffold Count 1
N50 Scaffolds 2,488,699 bp
Longest Scaffold 2,488,699 bp
Genome Size 2,488,699 bp
Protein Count 2,438
Coding Density 86.02%
GC Percentage 35.23%
Ambiguous Bases N/A
GTDB representative GCA_900099625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM80737v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03200076
Country China
Date 2014-12-23
Genbank Assembly Accession GCA_000807375.1
Genome Category Isolate
Genome Representation full
Isolate fresh raw milk
Isolation Source fresh raw milk
Latitude Longitude None
Molecule Count 1
CDS Count 2,417
Refseq Category na
Seq Rel Date 2014/12/23
Spanned Gaps 0
Species Taxid 1358
SSU Count 6
Submitter Institute of Microbiology
Taxid 1360
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None