Tepidimonas taiwanensis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Tepidimonas; s__Tepidimonas taiwanensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__; g__Tepidimonas; s__Tepidimonas taiwanensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; x__unclassified Burkholderiales; x__Burkholderiales Genera incertae sedis; g__Tepidimonas; s__Tepidimonas taiwanensis
NCBI Strain Identifiers VT154-175
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.91%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 50.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 18
Contig Count 84
N50 Contigs 71,974 bp
Longest Contig 158,174 bp
Scaffold Count 80
N50 Scaffolds 79,854 bp
Longest Scaffold 278,232 bp
Genome Size 2,927,205 bp
Protein Count 2,716
Coding Density 91.30%
GC Percentage 68.66%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Tep_taiw_VT154-175
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03176936
Country Italy: Viterbo
Date 2014-12-23
Genbank Assembly Accession GCA_000807215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hot spring water
Latitude Longitude None
Molecule Count N/A
CDS Count 2,678
Refseq Category representative genome
Seq Rel Date 2014/12/23
Spanned Gaps 7
Species Taxid 307486
SSU Count 4
Submitter University of Rome "Foro Italico"
Taxid 307486
Total Gap Length 137
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTKY00000000.1