Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Livingstone
NCBI Strain Identifiers CFSAN024717
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 41
N50 Contigs 253,224 bp
Longest Contig 695,493 bp
Scaffold Count 41
N50 Scaffolds 253,224 bp
Longest Scaffold 695,493 bp
Genome Size 4,718,186 bp
Protein Count 4,367
Coding Density 87.58%
GC Percentage 52.20%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN024717_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03079662
Country Chile: Los Rios
Date 2014-12-22
Genbank Assembly Accession GCA_000807055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sea Lion
Latitude Longitude None
Molecule Count N/A
CDS Count 4,647
Refseq Category na
Seq Rel Date 2014/12/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter Center for Food Safety and Applied Nutrition
Taxid 260680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 76
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWRF00000000.1