Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Senftenberg
NCBI Strain Identifiers CFSAN024719
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 43
N50 Contigs 305,226 bp
Longest Contig 627,489 bp
Scaffold Count 43
N50 Scaffolds 305,226 bp
Longest Scaffold 627,489 bp
Genome Size 4,823,531 bp
Protein Count 4,531
Coding Density 87.45%
GC Percentage 52.00%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN024719_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03079664
Country Chile: Valparaiso
Date 2014-12-22
Genbank Assembly Accession GCA_000807035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Kelp Gull
Latitude Longitude None
Molecule Count N/A
CDS Count 4,819
Refseq Category na
Seq Rel Date 2014/12/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter Center for Food Safety and Applied Nutrition
Taxid 28150
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWRD00000000.1