Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Anatum
NCBI Strain Identifiers CFSAN024764
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.28%
CheckM Strain Heterogeneity 33.33
5S Count 5
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 60
N50 Contigs 223,480 bp
Longest Contig 410,258 bp
Scaffold Count 60
N50 Scaffolds 223,480 bp
Longest Scaffold 410,258 bp
Genome Size 4,735,191 bp
Protein Count 4,477
Coding Density 87.74%
GC Percentage 52.14%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN024764_02.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03079709
Country Chile: Metropolitan region Santiago
Date 2014-12-22
Genbank Assembly Accession GCA_000806625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,763
Refseq Category na
Seq Rel Date 2014/12/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter Center for Food Safety and Applied Nutrition
Taxid 58712
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWQO00000000.1