Edwardsiella piscicida
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Edwardsiella; s__Edwardsiella piscicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Hafniaceae; g__Edwardsiella; s__Edwardsiella tarda
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Hafniaceae; g__Edwardsiella; s__Edwardsiella tarda
NCBI Strain Identifiers ET883
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001729265.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.97%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 167
N50 Contigs 48,654 bp
Longest Contig 170,418 bp
Scaffold Count 167
N50 Scaffolds 48,654 bp
Longest Scaffold 170,418 bp
Genome Size 3,829,674 bp
Protein Count 3,523
Coding Density 86.35%
GC Percentage 59.62%
Ambiguous Bases N/A
GTDB representative GCA_001729265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM80451v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03004776
Country Norway
Date 2014-12-18
Genbank Assembly Accession GCA_000804515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,544
Refseq Category na
Seq Rel Date 2014/12/18
Spanned Gaps 0
Species Taxid 636
SSU Count 1
Submitter East China University of Science and Technology
Taxid 636
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JRGQ00000000.1