Phytoplasma sp000009845
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Acholeplasmatales; f__Acholeplasmataceae; g__Phytoplasma; s__Phytoplasma sp000009845
Filtered NCBI Taxonomy d__Bacteria; p__Tenericutes; c__Mollicutes; o__Acholeplasmatales; f__Acholeplasmataceae; g__Candidatus Phytoplasma; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Tenericutes; c__Mollicutes; o__Acholeplasmatales; f__Acholeplasmataceae; g__Candidatus Phytoplasma; x__Candidatus Phytoplasma asteris; s__Chrysanthemum yellows phytoplasma
NCBI Strain Identifiers CYP
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000009845.1)
Genome Characteristics
CheckM Completeness 97.14%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 252
N50 Contigs 6,555 bp
Longest Contig 27,964 bp
Scaffold Count 252
N50 Scaffolds 6,555 bp
Longest Scaffold 27,964 bp
Genome Size 659,699 bp
Protein Count 741
Coding Density 79.90%
GC Percentage 28.32%
Ambiguous Bases N/A
GTDB representative GCA_000009845.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM80332v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03159445
Country Italy: Liguria
Date 2014-12-18
Genbank Assembly Accession GCA_000803325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chrysanthemum yellows
Latitude Longitude None
Molecule Count N/A
CDS Count 700
Refseq Category na
Seq Rel Date 2014/12/18
Spanned Gaps 0
Species Taxid 238674
SSU Count 1
Submitter Universita di Udine
Taxid 238674
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSWH00000000.1