Xanthomonas cannabis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas cannabis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas cannabis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas cannabis; x__Xanthomonas cannabis pv. cannabis
NCBI Strain Identifiers NCPPB 2877
GTDB Type Material Designation not type material
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 257
N50 Contigs 38,306 bp
Longest Contig 102,531 bp
Scaffold Count 257
N50 Scaffolds 38,306 bp
Longest Scaffold 102,531 bp
Genome Size 4,756,730 bp
Protein Count 4,090
Coding Density 85.63%
GC Percentage 65.78%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name NCPPB2877_E1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03164131
Country Romania: Lovrin; Timis County
Date 2014-12-16
Genbank Assembly Accession GCA_000802365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,162
Refseq Category na
Seq Rel Date 2014/12/16
Spanned Gaps 0
Species Taxid 1885674
SSU Count 1
Submitter Institut de Recherche pour le Developpement
Taxid 1885894
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSZE00000000.1