Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes; x__Listeria monocytogenes SHL010
NCBI Strain Identifiers SHL010
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 52
N50 Contigs 259,950 bp
Longest Contig 576,460 bp
Scaffold Count 52
N50 Scaffolds 259,950 bp
Longest Scaffold 576,460 bp
Genome Size 3,081,698 bp
Protein Count 3,093
Coding Density 90.19%
GC Percentage 37.91%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name L_monocytogenes_SHL010_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03265955
Country China: Shanghai
Date 2014-12-15
Genbank Assembly Accession GCA_000801515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count N/A
CDS Count 3,116
Refseq Category na
Seq Rel Date 2014/12/15
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter University of Maryland, College Park
Taxid 1302630
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master APIJ00000000.1