Solidesulfovibrio sp000801335
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Desulfobacterota; c__Desulfovibrionia; o__Desulfovibrionales; f__Desulfovibrionaceae; g__Solidesulfovibrio; s__Solidesulfovibrio sp000801335
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Deltaproteobacteria; o__Desulfovibrionales; f__Desulfovibrionaceae; g__Desulfovibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Deltaproteobacteria; o__Desulfovibrionales; f__Desulfovibrionaceae; g__Desulfovibrio; s__Desulfovibrio sp. TomC
NCBI Strain Identifiers TomC
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 84
N50 Contigs 189,622 bp
Longest Contig 370,485 bp
Scaffold Count 84
N50 Scaffolds 189,622 bp
Longest Scaffold 370,485 bp
Genome Size 5,073,175 bp
Protein Count 4,431
Coding Density 86.55%
GC Percentage 61.71%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM80133v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03121506
Country Russia: Centralniy; Kuzbass; Western Siberia
Date 2014-12-15
Genbank Assembly Accession GCA_000801335.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leachate from the gold ore mining spoils at an abandoned mining site
Latitude Longitude None
Molecule Count N/A
CDS Count 4,375
Refseq Category na
Seq Rel Date 2014/12/15
Spanned Gaps 0
Species Taxid 1562888
SSU Count 1
Submitter Centre Bioengineering RAS
Taxid 1562888
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSEH00000000.1