Neisseria meningitidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
NCBI Strain Identifiers NM3682
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900638555.1)
Genome Characteristics
CheckM Completeness 99.83%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 2,196,674 bp
Longest Contig 2,196,674 bp
Scaffold Count 1
N50 Scaffolds 2,196,674 bp
Longest Scaffold 2,196,674 bp
Genome Size 2,196,674 bp
Protein Count 2,058
Coding Density 81.87%
GC Percentage 51.64%
Ambiguous Bases N/A
GTDB representative GCA_900638555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM80031v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03020600
Country United Kingdom: Scotland
Date 2014-12-9
Genbank Assembly Accession GCA_000800315.1
Genome Category Isolate
Genome Representation full
Isolate NM3682
Isolation Source Human
Latitude Longitude 55.85 N 4.23 W
Molecule Count 1
CDS Count 2,463
Refseq Category na
Seq Rel Date 2014/12/09
Spanned Gaps 0
Species Taxid 487
SSU Count 4
Submitter University of Pittsburgh
Taxid 487
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None