Halomonas hydrothermalis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Halomonadaceae; g__Halomonas; s__Halomonas hydrothermalis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Halomonadaceae; g__Halomonas; s__Halomonas hydrothermalis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Halomonadaceae; g__Halomonas; s__Halomonas hydrothermalis
NCBI Strain Identifiers MTCC 5445
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002442575.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.89%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 35
N50 Contigs 283,157 bp
Longest Contig 424,340 bp
Scaffold Count 35
N50 Scaffolds 283,157 bp
Longest Scaffold 424,340 bp
Genome Size 3,842,329 bp
Protein Count 3,484
Coding Density 91.11%
GC Percentage 60.25%
Ambiguous Bases N/A
GTDB representative GCA_002442575.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name HaloHydro1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03199083
Country India: Aadri Veraval Gujarat coast
Date 2014-12-9
Genbank Assembly Accession GCA_000800185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sea water
Latitude Longitude 20.959 N 70.2794 E
Molecule Count N/A
CDS Count 3,473
Refseq Category na
Seq Rel Date 2014/12/09
Spanned Gaps 0
Species Taxid 115561
SSU Count 2
Submitter CSIR-Central Salt and Marine Chemicals Research Institute
Taxid 115561
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTDR00000000.1