Rhizobacter sp000800095
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Rhizobacter; s__Rhizobacter sp000800095
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__; g__Methylibium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; x__unclassified Burkholderiales; x__Burkholderiales Genera incertae sedis; g__Methylibium; s__Methylibium sp. YR605
NCBI Strain Identifiers YR605
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.59%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 60
N50 Contigs 201,291 bp
Longest Contig 637,405 bp
Scaffold Count 58
N50 Scaffolds 201,291 bp
Longest Scaffold 637,405 bp
Genome Size 6,737,412 bp
Protein Count 6,129
Coding Density 92.56%
GC Percentage 69.19%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM80009v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02787082
Country None
Date 2014-12-9
Genbank Assembly Accession GCA_000800095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,116
Refseq Category na
Seq Rel Date 2014/12/09
Spanned Gaps 2
Species Taxid 1500265
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1500265
Total Gap Length 20
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUHA00000000.1