Microbacterium sp000799385
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sp000799385
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sp. CF335
NCBI Strain Identifiers CF335
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 4
N50 Contigs 1,682,492 bp
Longest Contig 1,682,492 bp
Scaffold Count 4
N50 Scaffolds 1,682,492 bp
Longest Scaffold 1,682,492 bp
Genome Size 3,018,951 bp
Protein Count 2,801
Coding Density 91.64%
GC Percentage 70.83%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM79938v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02787151
Country None
Date 2014-12-9
Genbank Assembly Accession GCA_000799385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,783
Refseq Category na
Seq Rel Date 2014/12/09
Spanned Gaps 0
Species Taxid 1500279
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1500279
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUGQ00000000.1