Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio fluvialis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio fluvialis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio fluvialis
NCBI Strain Identifiers ZOR0035
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001558415.2)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 122
N50 Contigs 77,099 bp
Longest Contig 182,309 bp
Scaffold Count 104
N50 Scaffolds 91,569 bp
Longest Scaffold 209,474 bp
Genome Size 4,620,763 bp
Protein Count 4,340
Coding Density 88.56%
GC Percentage 50.09%
Ambiguous Bases N/A
GTDB representative GCA_001558415.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ZOR0035.1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03021533
Country USA: Eugene
Date 2014-12-08
Genbank Assembly Accession GCA_000799015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source organic material
Latitude Longitude 44.0459 N 123.0720 W
Molecule Count N/A
CDS Count 4,326
Refseq Category na
Seq Rel Date 2014/12/08
Spanned Gaps 18
Species Taxid 676
SSU Count 0
Submitter University of Oregon
Taxid 676
Total Gap Length 227
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTLJ00000000.1