Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers AZPAE14727
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 98.72%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 294
N50 Contigs 101,034 bp
Longest Contig 313,469 bp
Scaffold Count 248
N50 Scaffolds 101,034 bp
Longest Scaffold 313,469 bp
Genome Size 7,362,494 bp
Protein Count 7,048
Coding Density 88.87%
GC Percentage 65.59%
Ambiguous Bases 156
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name AZPAE14727
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03105504
Country USA
Date 2014-12-4
Genbank Assembly Accession GCA_000794885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source itra-abdominal tract infection
Latitude Longitude None
Molecule Count N/A
CDS Count 7,230
Refseq Category na
Seq Rel Date 2014/12/04
Spanned Gaps 46
Species Taxid 287
SSU Count 1
Submitter AstraZeneca
Taxid 287
Total Gap Length 2762
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTWF00000000.1