Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers AZPAE14698
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 97.19%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 483
N50 Contigs 33,960 bp
Longest Contig 129,770 bp
Scaffold Count 378
N50 Scaffolds 36,421 bp
Longest Scaffold 138,699 bp
Genome Size 6,467,367 bp
Protein Count 6,369
Coding Density 88.12%
GC Percentage 65.52%
Ambiguous Bases 175
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name AZPAE14698
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03105476
Country Israel
Date 2014-12-4
Genbank Assembly Accession GCA_000794705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source respiratory tract infection
Latitude Longitude None
Molecule Count N/A
CDS Count 6,472
Refseq Category na
Seq Rel Date 2014/12/04
Spanned Gaps 105
Species Taxid 287
SSU Count 1
Submitter AstraZeneca
Taxid 287
Total Gap Length 7264
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTXH00000000.1