Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers AZPAE14838
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 1.89%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 118
N50 Contigs 154,009 bp
Longest Contig 419,795 bp
Scaffold Count 97
N50 Scaffolds 166,929 bp
Longest Scaffold 504,707 bp
Genome Size 7,113,432 bp
Protein Count 6,776
Coding Density 88.89%
GC Percentage 65.44%
Ambiguous Bases 2
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name AZPAE14838
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03105539
Country China: Beijing
Date 2014-12-4
Genbank Assembly Accession GCA_000794335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source respiratory tract infection
Latitude Longitude None
Molecule Count N/A
CDS Count 6,969
Refseq Category na
Seq Rel Date 2014/12/04
Spanned Gaps 21
Species Taxid 287
SSU Count 1
Submitter AstraZeneca
Taxid 287
Total Gap Length 2057
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTUW00000000.1