Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers AZPAE14859
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 169
N50 Contigs 122,936 bp
Longest Contig 451,844 bp
Scaffold Count 122
N50 Scaffolds 133,590 bp
Longest Scaffold 451,844 bp
Genome Size 6,527,863 bp
Protein Count 6,060
Coding Density 89.25%
GC Percentage 66.27%
Ambiguous Bases 22
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name AZPAE14859
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03105558
Country Spain: Bilbao
Date 2014-12-4
Genbank Assembly Accession GCA_000790035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urinary tract infection
Latitude Longitude None
Molecule Count N/A
CDS Count 6,222
Refseq Category na
Seq Rel Date 2014/12/04
Spanned Gaps 47
Species Taxid 287
SSU Count 1
Submitter AstraZeneca
Taxid 287
Total Gap Length 4763
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTUD00000000.1