Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers AZPAE14856
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.22%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 161
N50 Contigs 99,981 bp
Longest Contig 395,602 bp
Scaffold Count 107
N50 Scaffolds 158,820 bp
Longest Scaffold 431,933 bp
Genome Size 6,335,571 bp
Protein Count 5,835
Coding Density 89.43%
GC Percentage 66.47%
Ambiguous Bases 12
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name AZPAE14856
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03105555
Country France: Paris
Date 2014-12-4
Genbank Assembly Accession GCA_000789965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source respiratory tract infection
Latitude Longitude None
Molecule Count N/A
CDS Count 5,985
Refseq Category na
Seq Rel Date 2014/12/04
Spanned Gaps 54
Species Taxid 287
SSU Count 1
Submitter AstraZeneca
Taxid 287
Total Gap Length 4904
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTUG00000000.1