GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida |
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Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida |
Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida |
NCBI Strain Identifiers | 2009-144K3 |
GTDB Type Material Designation | not type material |
GTDB Representative of Species | False (representative is GCA_001643305.1 ) |
CheckM Completeness | 100.0% |
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CheckM Contamination | 0.58% |
CheckM Strain Heterogeneity | 100.0 |
5S Count | 9 |
16S Count | 5 |
23S Count | 7 |
tRNA Count | 20 |
Contig Count | 214 |
N50 Contigs | 64,305 bp |
Longest Contig | 218,040 bp |
Scaffold Count | 214 |
N50 Scaffolds | 64,305 bp |
Longest Scaffold | 218,040 bp |
Genome Size | 4,958,831 bp |
Protein Count | 4,921 |
Coding Density | 86.21% |
GC Percentage | 58.35% |
Ambiguous Bases | 11 |
GTDB representative | GCA_001643305.1 |
GTDB representative of species | False |
Assembly Level | Contig |
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Assembly Name | ASM78679v1 |
Assembly Type | n/a |
Bioproject | PRJNA224116 |
Biosample | SAMN03120844 |
Country | Canada: New Brunswick |
Date | 2014-11-25 |
Genbank Assembly Accession | GCA_000786795.1 |
Genome Category | Isolate |
Genome Representation | full |
Isolate | None |
Isolation Source | sick fish |
Latitude Longitude | None |
Molecule Count | N/A |
CDS Count | 4,798 |
Refseq Category | na |
Seq Rel Date | 2014/11/25 |
Spanned Gaps | 0 |
Species Taxid | 645 |
SSU Count | 9 |
Submitter | Universite Laval |
Taxid | 29491 |
Total Gap Length | 0 |
Translation Table | 11 |
tRNA Count (total) | 112 |
Type Material | None |
Unspanned Gaps | 0 |
Version Status | latest |
WGS Master | JRYV00000000.1 |