Xenorhabdus nematophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Xenorhabdus; s__Xenorhabdus nematophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Xenorhabdus; s__Xenorhabdus nematophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Xenorhabdus; s__Xenorhabdus nematophila
NCBI Strain Identifiers C2-3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000252955.1)
Genome Characteristics
CheckM Completeness 99.41%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 7
tRNA Count 20
Contig Count 284
N50 Contigs 48,919 bp
Longest Contig 190,766 bp
Scaffold Count 284
N50 Scaffolds 48,919 bp
Longest Scaffold 190,766 bp
Genome Size 4,386,383 bp
Protein Count 4,851
Coding Density 82.65%
GC Percentage 43.72%
Ambiguous Bases 32
GTDB representative GCA_000252955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM78566v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03070056
Country South Korea
Date 2014-11-20
Genbank Assembly Accession GCA_000785665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,228
Refseq Category na
Seq Rel Date 2014/11/20
Spanned Gaps 0
Species Taxid 628
SSU Count 11
Submitter Kyungpook National University
Taxid 628
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JRJV00000000.1