Neisseria meningitidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
NCBI Strain Identifiers NM3681
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900638555.1)
Genome Characteristics
CheckM Completeness 99.76%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 2
N50 Contigs 1,380,815 bp
Longest Contig 1,380,815 bp
Scaffold Count 2
N50 Scaffolds 1,380,815 bp
Longest Scaffold 1,380,815 bp
Genome Size 2,198,959 bp
Protein Count 2,070
Coding Density 81.78%
GC Percentage 51.66%
Ambiguous Bases N/A
GTDB representative GCA_900638555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM78507v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03020452
Country Gambia
Date 2014-11-17
Genbank Assembly Accession GCA_000785075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 13.4 N 16.6 W
Molecule Count N/A
CDS Count 2,482
Refseq Category na
Seq Rel Date 2014/11/17
Spanned Gaps 0
Species Taxid 487
SSU Count 5
Submitter University of Pittsburgh
Taxid 487
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JREU00000000.1