Thermotoga petrophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Thermotogota; c__Thermotogae; o__Thermotogales; f__Thermotogaceae; g__Thermotoga; s__Thermotoga petrophila
Filtered NCBI Taxonomy d__Bacteria; p__Thermotogae; c__Thermotogae; o__Thermotogales; f__Thermotogaceae; g__Thermotoga; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Thermotogae; c__Thermotogae; o__Thermotogales; f__Thermotogaceae; g__Thermotoga; s__Thermotoga sp. TBGT1766
NCBI Strain Identifiers TBGT1766
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000016785.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 19
N50 Contigs 243,875 bp
Longest Contig 393,487 bp
Scaffold Count 19
N50 Scaffolds 243,875 bp
Longest Scaffold 393,487 bp
Genome Size 1,736,569 bp
Protein Count 1,773
Coding Density 95.01%
GC Percentage 46.36%
Ambiguous Bases N/A
GTDB representative GCA_000016785.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM78482v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03143098
Country Norway: Troll B
Date 2014-11-17
Genbank Assembly Accession GCA_000784825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source deep subsurface oil reservoir
Latitude Longitude None
Molecule Count N/A
CDS Count 1,756
Refseq Category na
Seq Rel Date 2014/11/17
Spanned Gaps 0
Species Taxid 1230478
SSU Count 1
Submitter University of Alberta
Taxid 1230478
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSFI00000000.1