Enterobacter himalayensis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter himalayensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter hormaechei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter hormaechei; sb__Enterobacter hormaechei subsp. xiangfangensis
NCBI Strain Identifiers ND20
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002003685.1)
Genome Characteristics
CheckM Completeness 99.47%
CheckM Contamination 0.79%
CheckM Strain Heterogeneity 20.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 71
N50 Contigs 170,301 bp
Longest Contig 446,101 bp
Scaffold Count 71
N50 Scaffolds 170,301 bp
Longest Scaffold 446,101 bp
Genome Size 4,854,421 bp
Protein Count 4,615
Coding Density 89.50%
GC Percentage 55.11%
Ambiguous Bases N/A
GTDB representative GCA_002003685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SPADES assembly of Enterobacter cloacae ND20
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03012836
Country USA
Date 2014-12-17
Genbank Assembly Accession GCA_000784095.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source excreted bodily substance
Latitude Longitude 46 N 96 W
Molecule Count N/A
CDS Count 4,730
Refseq Category na
Seq Rel Date 2014/12/17
Spanned Gaps 0
Species Taxid 158836
SSU Count 1
Submitter JCVI
Taxid 1296536
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTCC00000000.2