Citrobacter europaeus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter europaeus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter freundii
NCBI Strain Identifiers FDAARGOS_61
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900079995.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 1
N50 Contigs 5,258,481 bp
Longest Contig 5,258,481 bp
Scaffold Count 1
N50 Scaffolds 5,258,481 bp
Longest Scaffold 5,258,481 bp
Genome Size 5,258,481 bp
Protein Count 4,813
Coding Density 88.24%
GC Percentage 51.82%
Ambiguous Bases N/A
GTDB representative GCA_900079995.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM78399v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02934510
Country USA
Date 2018-1-29
Genbank Assembly Accession GCA_000783995.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rectal swab
Latitude Longitude None
Molecule Count 1
CDS Count 4,995
Refseq Category na
Seq Rel Date 2018/01/29
Spanned Gaps 0
Species Taxid 546
SSU Count 8
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 546
Total Gap Length 0
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None