Burkholderia mallei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia mallei
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia pseudomallei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__pseudomallei group; s__Burkholderia pseudomallei; x__Burkholderia pseudomallei MSHR435
NCBI Strain Identifiers MSHR435
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011705.1)
Genome Characteristics
CheckM Completeness 92.68%
CheckM Contamination 1.35%
CheckM Strain Heterogeneity 100.0
5S Count 4
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 65
N50 Contigs 237,437 bp
Longest Contig 648,887 bp
Scaffold Count 2
N50 Scaffolds 3,837,469 bp
Longest Scaffold 3,837,469 bp
Genome Size 7,133,242 bp
Protein Count 5,924
Coding Density 83.67%
GC Percentage 67.98%
Ambiguous Bases 2
GTDB representative GCA_000011705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name BPD
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02999478
Country Australia
Date 2014-11-12
Genbank Assembly Accession GCA_000775165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source clinical isolate
Latitude Longitude None
Molecule Count 2
CDS Count 7,311
Refseq Category na
Seq Rel Date 2014/11/12
Spanned Gaps 65
Species Taxid 28450
SSU Count 3
Submitter Los Alamos National Laboratory
Taxid 1435985
Total Gap Length 6500
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JRFP00000000.1