Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers UMTGB204
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 60
N50 Contigs 947,033 bp
Longest Contig 1,106,338 bp
Scaffold Count 60
N50 Scaffolds 947,033 bp
Longest Scaffold 1,106,338 bp
Genome Size 5,652,224 bp
Protein Count 5,028
Coding Density 86.77%
GC Percentage 45.47%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM77265v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03145036
Country Malaysia: Bidong Island; Terengganu
Date 2014-11-6
Genbank Assembly Accession GCA_000772655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,118
Refseq Category na
Seq Rel Date 2014/11/06
Spanned Gaps 0
Species Taxid 680
SSU Count 9
Submitter Monash University Malaysia
Taxid 680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 116
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSFE00000000.1