Bifidobacterium pseudolongum
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium pseudolongum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium pseudolongum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium pseudolongum; sb__Bifidobacterium pseudolongum subsp. pseudolongum; x__Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099
NCBI Strain Identifiers DSM 20099
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (9 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 23
N50 Contigs 487,258 bp
Longest Contig 493,169 bp
Scaffold Count 23
N50 Scaffolds 487,258 bp
Longest Scaffold 493,169 bp
Genome Size 1,901,000 bp
Protein Count 1,593
Coding Density 88.94%
GC Percentage 63.07%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name DSM-20099
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02442017
Country None
Date 2014-11-4
Genbank Assembly Accession GCA_000771225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,564
Refseq Category na
Seq Rel Date 2014/11/04
Spanned Gaps 0
Species Taxid 1694
SSU Count 1
Submitter Key Laboratory of Dairy BiotecInner Mongolia Agricultural University
Taxid 1437595
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JDTZ00000000.1