Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Proteus; s__Proteus mirabilis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
NCBI Strain Identifiers Pm-Oxa48
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160755.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 91
N50 Contigs 114,052 bp
Longest Contig 291,086 bp
Scaffold Count 91
N50 Scaffolds 114,052 bp
Longest Scaffold 291,086 bp
Genome Size 4,137,208 bp
Protein Count 3,792
Coding Density 84.98%
GC Percentage 39.15%
Ambiguous Bases N/A
GTDB representative GCA_000160755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM77076v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03140307
Country Gaza Strip
Date 2014-11-03
Genbank Assembly Accession GCA_000770765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude 31.4167 N 34.3333 E
Molecule Count N/A
CDS Count 3,859
Refseq Category na
Seq Rel Date 2014/11/03
Spanned Gaps 0
Species Taxid 584
SSU Count 6
Submitter New Jersey Medical School-Rutgers University
Taxid 584
Total Gap Length 0
Translation Table 11
tRNA Count (total) 80
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSCB00000000.1