Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas gulae
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas gulae
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas gulae
NCBI Strain Identifiers COT-052 OH1451
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000378065.1)
Genome Characteristics
CheckM Completeness 99.92%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 89
N50 Contigs 46,861 bp
Longest Contig 153,410 bp
Scaffold Count 89
N50 Scaffolds 46,861 bp
Longest Scaffold 153,410 bp
Genome Size 2,463,382 bp
Protein Count 2,181
Coding Density 87.48%
GC Percentage 48.53%
Ambiguous Bases 31
GTDB representative GCA_000378065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM76878v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03002869
Country United Kingdom: Leicestershire
Date 2014-10-27
Genbank Assembly Accession GCA_000768785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dog mouth
Latitude Longitude None
Molecule Count N/A
CDS Count 2,165
Refseq Category na
Seq Rel Date 2014/10/27
Spanned Gaps 0
Species Taxid 111105
SSU Count 1
Submitter UC Davis
Taxid 111105
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JRAI00000000.1