Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli NCTC 50110
NCBI Strain Identifiers NCTC 50110
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 18
Contig Count 113
N50 Contigs 103,568 bp
Longest Contig 265,135 bp
Scaffold Count 113
N50 Scaffolds 103,568 bp
Longest Scaffold 265,135 bp
Genome Size 4,725,415 bp
Protein Count 4,481
Coding Density 88.12%
GC Percentage 50.72%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CREcoli50110
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02837053
Country None
Date 2014-10-15
Genbank Assembly Accession GCA_000766965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,868
Refseq Category na
Seq Rel Date 2014/10/15
Spanned Gaps 0
Species Taxid 562
SSU Count 0
Submitter University of Leeds
Taxid 1333537
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASRI00000000.1