Porphyromonas_A canoris
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas_A; s__Porphyromonas_A canoris
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas canoris
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Porphyromonas; s__Porphyromonas canoris
NCBI Strain Identifiers COT-108 OH1224
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000769115.1)
Genome Characteristics
CheckM Completeness 99.11%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 21
N50 Contigs 356,707 bp
Longest Contig 457,003 bp
Scaffold Count 21
N50 Scaffolds 356,707 bp
Longest Scaffold 457,003 bp
Genome Size 2,308,674 bp
Protein Count 1,941
Coding Density 87.49%
GC Percentage 44.64%
Ambiguous Bases 58
GTDB representative GCA_000769115.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM76597v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03004343
Country United Kingdom: Leicestershire
Date 2014-10-10
Genbank Assembly Accession GCA_000765975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dog mouth
Latitude Longitude None
Molecule Count N/A
CDS Count 1,904
Refseq Category na
Seq Rel Date 2014/10/10
Spanned Gaps 0
Species Taxid 36875
SSU Count 6
Submitter UC Davis
Taxid 36875
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQZX00000000.1