Vibrio navarrensis
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio navarrensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio navarrensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio navarrensis
NCBI Strain Identifiers 08-2462
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000764325.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.98%
CheckM Strain Heterogeneity 33.33
5S Count 1
16S Count 1
23S Count 3
tRNA Count 16
Contig Count 236
N50 Contigs 51,584 bp
Longest Contig 215,492 bp
Scaffold Count 236
N50 Scaffolds 51,584 bp
Longest Scaffold 215,492 bp
Genome Size 4,165,621 bp
Protein Count 3,808
Coding Density 87.11%
GC Percentage 48.56%
Ambiguous Bases N/A
GTDB representative GCA_000764325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 08-2462v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02708868
Country USA: Florida
Date 2014-10-7
Genbank Assembly Accession GCA_000764335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Clinical; blood
Latitude Longitude 28.1000 N 81.6000 W
Molecule Count N/A
CDS Count 3,900
Refseq Category na
Seq Rel Date 2014/10/07
Spanned Gaps 0
Species Taxid 29495
SSU Count 1
Submitter CDC
Taxid 29495
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMCI00000000.1