Paraclostridium bifermentans
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Peptostreptococcales; f__Peptostreptococcaceae; g__Paraclostridium; s__Paraclostridium bifermentans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sp. NCR
NCBI Strain Identifiers NCR
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006802875.1)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 0.7%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 1
23S Count 3
tRNA Count 18
Contig Count 56
N50 Contigs 195,804 bp
Longest Contig 644,619 bp
Scaffold Count 56
N50 Scaffolds 195,804 bp
Longest Scaffold 644,619 bp
Genome Size 3,618,408 bp
Protein Count 3,608
Coding Density 86.87%
GC Percentage 28.15%
Ambiguous Bases N/A
GTDB representative GCA_006802875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM76400v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03002484
Country India: Sardar Krushinagar Agricultural University; Dantiwada; Gujarat
Date 2014-10-6
Genbank Assembly Accession GCA_000764005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rumen fluid
Latitude Longitude 24.32 N 72.31 E
Molecule Count N/A
CDS Count 3,470
Refseq Category na
Seq Rel Date 2014/10/06
Spanned Gaps 0
Species Taxid 1538552
SSU Count 3
Submitter Anand Agricultural University
Taxid 1538552
Total Gap Length 0
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQHY00000000.1