Vibrio coralliilyticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio coralliilyticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio coralliilyticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio coralliilyticus
NCBI Strain Identifiers OCN014
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000176135.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 0.81%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 3
N50 Contigs 3,463,115 bp
Longest Contig 3,463,115 bp
Scaffold Count 3
N50 Scaffolds 3,463,115 bp
Longest Scaffold 3,463,115 bp
Genome Size 5,732,794 bp
Protein Count 5,296
Coding Density 88.16%
GC Percentage 45.78%
Ambiguous Bases N/A
GTDB representative GCA_000176135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM76353v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03010512
Country USA: Hawaii: Kaneohe; Oahu
Date 2014-10-28
Genbank Assembly Accession GCA_000763535.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source coral
Latitude Longitude 21.4597 N 157.8042 W
Molecule Count 3
CDS Count 5,180
Refseq Category representative genome
Seq Rel Date 2014/10/28
Spanned Gaps 0
Species Taxid 190893
SSU Count 6
Submitter University of Hawaii at Manoa
Taxid 190893
Total Gap Length 0
Translation Table 11
tRNA Count (total) 86
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None