Enterococcus faecalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
NCBI Strain Identifiers MA2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000392875.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 40
N50 Contigs 225,937 bp
Longest Contig 582,484 bp
Scaffold Count 40
N50 Scaffolds 225,937 bp
Longest Scaffold 582,484 bp
Genome Size 2,979,065 bp
Protein Count 2,881
Coding Density 87.83%
GC Percentage 37.40%
Ambiguous Bases N/A
GTDB representative GCA_000392875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM76343v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02950891
Country China: Shenzhen
Date 2014-10-3
Genbank Assembly Accession GCA_000763435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source linezolid-resistant strain isolated from parent strain MA1
Latitude Longitude None
Molecule Count N/A
CDS Count 3,038
Refseq Category na
Seq Rel Date 2014/10/03
Spanned Gaps 0
Species Taxid 1351
SSU Count 1
Submitter The Affiliated Shenzhen Nanshan Hospital of Guangdong Medical College, Shenzhen, China;
Taxid 1351
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPTZ00000000.1